PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 487335
Common NameARALYDRAFT_487335, DREB2A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family ERF
Protein Properties Length: 339aa    MW: 38375.3 Da    PI: 4.7144
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
487335genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-1977127155
     AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
             + ++GVr++  +g+WvAeIr+p   + r  r +lg+f taeeAa a+++a+k+++g
  487335  77 CSFRGVRQRI-WGKWVAEIREP---N-RgSRLWLGTFPTAEEAASAYDEAAKAMYG 127
             579****998.**********8...3.35************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.8E-1477127IPR001471AP2/ERF domain
CDDcd000185.58E-3277135No hitNo description
SMARTSM003802.2E-3978141IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-3178136IPR001471AP2/ERF domain
PROSITE profilePS5103222.15578135IPR001471AP2/ERF domain
PRINTSPR003678.7E-107990IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-2179136IPR016177DNA-binding domain
PRINTSPR003678.7E-10101117IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0010224Biological Processresponse to UV-B
GO:0010286Biological Processheat acclimation
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MAVYDQSGDI NRTQLDTSRK RKSRSRADGT TVAERLKRWK EYNENVEEIS TKKRKVPAKG  60
SKKGCMKGKG GPENGRCSFR GVRQRIWGKW VAEIREPNRG SRLWLGTFPT AEEAASAYDE  120
AAKAMYGPLA RLNFPRSDGS EVTSTSSQSE VCTVETPGCV HVKTEDADCE SKPMFCEAKP  180
MYRLENGAEE MKRAVKADKD WLSEFEHNYW RDVLKEKEKQ KEQEIVETCQ QQEQQDSLSV  240
TDYGWPNDLD QSHLDSSDMF DVDELLRDIN GDDVFTGLNQ DQYPGNNVTN GSYRLESQQG  300
GFDPLQSLNY GYGLPPFQFE AKDGNGVFDD LSYLDLEN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-1779135360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11722SRKRKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0077900.0AB007790.1 Arabidopsis thaliana mRNA for DREB2A, complete cds.
GenBankAB0106920.0AB010692.1 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18I23.
GenBankAB0165700.0AB016570.1 Arabidopsis thaliana DREB2A gene, complete cds.
GenBankAY0639720.0AY063972.1 Arabidopsis thaliana putative DREB2A protein (At5g05410) mRNA, complete cds.
GenBankAY5360560.0AY536056.1 Fraxinus pennsylvanica dehydration responsive element binding protein (DREB2A) mRNA, complete cds.
GenBankAY6462230.0AY646223.1 Oryza sativa (indica cultivar-group) DREB-like protein gene, complete cds.
GenBankCP0026880.0CP002688.1 Arabidopsis thaliana chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002871157.10.0DRE-binding protein 2A
SwissprotO821320.0DRE2A_ARATH; Dehydration-responsive element-binding protein 2A
TrEMBLD7LYE10.0D7LYE1_ARALL; DRE-binding protein 2A
STRINGfgenesh2_kg.6__469__AT5G05410.10.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM28741765
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.10.0DRE-binding protein 2A